Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920809.1_cds_XP_016469883.1_62387
CDS Infomation

[gene=LOC107792204] [db_xref=GeneID:107792204] [protein=phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like] [protein_id=XP_016469883.1] [location=complement(join(28645..29193,29365..29434,30567..30697,31081..31127,31473..31552,32201..32262,32343..32429,32517..32693,33413..33478,33650..33706,33800..33901,35201..35623))] [gbkey=CDS]
Sequence

ATGGACTCAGGATCTGCTGATGTATCAGATTCACAACCTGTTACGGCATCAAATGCAGCA
AGGTCTACTGCAGTGGATTCTGCACCAGGCCAGTCAACAGAGGAGGTGCCTTCAAAGCTC
TCTACTTCAGGCATCTCCTCATGGGCCAAAAATTTAAAAATTCCACAACCGTTCACGGGA
TCCCAAGATGAACAATCATCTGGAAATGCTACCAAATCAACCTTTGCTCGTTTCACTGGT
GGGCTTGGAATGCGTCTGTCCCCTAAGTCTCCTGCAGCTGAAAATTCTGAAGGAACATCA
ACATCGCCATCCAGTTTTATTGGAACATTCACCAAAGGATTAGTTGACTCTTCGAAGAAT
GCAGTGAAGGCTGTGCAGGTTAAAGCGCGACATGTTGTATCCCAGAATAAGAGAAGATAC
CAGGAAGGAGGATTTGATTTAGATTTGACCTACATAACAGAGAATATAATTGCCATGGGC
TTCCCTGCTGGTGATATGAGCTCTGGCATTTTTGGCTATGTTGAGGGGTTCTACAGAAAC
CACATGGAAGAAGTCATTAAATTCTTTGAAACTCATCATAAGGATAAATACAAAGTTTAC
AATCTTTGTTCTGAAAGATTGTATGATGCTTCTCTGTTTGAGGGAAAGGTTGCTTGTTTT
CCATTTGATGATCACAACTGCCCTCCTATTCAACTCATTATATCGTTTTGTCAAAGTGCA
TACTCTTGGTTGAAGGAGGATATCGAAAATGTTGTGGTTGTACATTGTAAGGCAGGAATG
GCAAGAACTGGTTTGATGATCTCTAGTCTTCTTCTATACTTGAAATTCTTTCCTACGGCG
GAGGAGTCTATGGATTACTACAACCAAAAGAGATGCGTAGATGGAAAAGGATTAGTTTTG
CCGAGCCAGATTAGATATGTCAAGTATTTCGAACGCATCTTAATGTACTTCAATGGAGAA
AACCAGCCTGGCCGCAGGTGCATGCTCAGAGGATTTCGCCTCCATAGGTGCCCTTATTGG
ATAAGGCCTTCTATTACAGTATCGGATCATAATGGTGTGCTCTTCTCAACAAAAAAACAT
CCAAGAACCAAGGATCTATCGCCTGAGGATTTTTGGTTCAGTGCACCAAAGAAAGGGGTT
ATGGTTTTTGCTCTTCCAGGCGAGCCTGGCCTTGCAGAGTTAGCTGGGGATTTCAAAATC
CATTTTCATGACGGTCAAGGAGACTTTTATTGTTGGCTGAATACAACAATGATAGAGAAC
AGGAAAGTTCTGACCACAGGCGACCTTGATGGTTTTGACAAGAGAAAATTACCATCACCT
GGTTTCCAAGTGGAAGTAGTCCTTGTGGACTATGATGCTGCCTTCCCTGCTCGACCCCAA
TCAGAAACCACCACCAGAGAATCAGCTGACAGTTCAAGTGCTAATCCTGCCCCTGGATCT
AATCCTACCTCAGGCGGTGAGCCTGCTGCCAGAAGTAACACGAACCAACACCCTGGGAAC
AGTGACAAGGATGACGTGTTCTCAGACAATGAATCTGAGGAAACTGGAATGTCAAAGACT
AGACAAACTAAAGCTGCTTCTGAAGCTAGTGCTCCTGCAGATGCAAAACCCCTTGGGTCC
AAAAACAATAATGATTCAGATAAATTATCAAGCTTGACACATAAGACAGAGCAAGTCTCG
TTGGGAGGTACAAGCTCTATACACAGCGAGCCTAAAAGAGATGGCTCAGATGGAGCTACC
TCTGGTGTTGAGGTTTCCAATCCGGTTGGAGGAGTGAGTGATTTCAAGGTAGTTGCAGCT
GATGCATCTGTTTTCTCATTTGGTGATGAAGAGGATTATGAAAGTGAATAA

Peptide Sequence

PEP ID

XP_016469883.1
PEP Infomation

PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like [Nicotiana tabacum]
Sequence

MDSGSADVSDSQPVTASNAARSTAVDSAPGQSTEEVPSKLSTSGISSWAKNLKIPQPFTG
SQDEQSSGNATKSTFARFTGGLGMRLSPKSPAAENSEGTSTSPSSFIGTFTKGLVDSSKN
AVKAVQVKARHVVSQNKRRYQEGGFDLDLTYITENIIAMGFPAGDMSSGIFGYVEGFYRN
HMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLIISFCQSA
YSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESMDYYNQKRCVDGKGLVL
PSQIRYVKYFERILMYFNGENQPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSTKKH
PRTKDLSPEDFWFSAPKKGVMVFALPGEPGLAELAGDFKIHFHDGQGDFYCWLNTTMIEN
RKVLTTGDLDGFDKRKLPSPGFQVEVVLVDYDAAFPARPQSETTTRESADSSSANPAPGS
NPTSGGEPAARSNTNQHPGNSDKDDVFSDNESEETGMSKTRQTKAASEASAPADAKPLGS
KNNNDSDKLSSLTHKTEQVSLGGTSSIHSEPKRDGSDGATSGVEVSNPVGGVSDFKVVAA
DASVFSFGDEEDYESE

Transcript Sequence

Gene sequence data has not been registered.